MRIQC: individual T1w report

Summary

  • BIDS filename: sub-0001_T1w.
  • Date and time: 2023-03-03, 12:52.
  • MRIQC version: 23.0.0rc0.
  • Workflow details:
    • Detected hat mask was too small
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
2023-03-02T17:37:32.267120 image/svg+xml Matplotlib v3.5.2, https://matplotlib.org/
Background noise
2023-03-02T16:13:59.723166 image/svg+xml Matplotlib v3.5.2, https://matplotlib.org/

Other

cjv0.30589550369069457
cnr4.326585425304048
efc0.7242117494881511
fber-1.0
fwhmavg4.059833571004891
fwhmx3.9882402377176422
fwhmy4.20418
fwhmz3.987080475297031
icvscsf0.24687818070111545
icvsgm0.43090040819523134
icvswm0.3222214111036532
inumed0.6791791915893555
inurange0.21909409463405616
qi10.0
qi28.271493976830401e-05
rpvecsf26.02043237924348
rpvegm15.02472151112156
rpvewm23.753276380110954
sizex240
sizey240
sizez220
snrcsf1.3102728555198342
snrgm6.886851968414294
snrtotal9.683802256027205
snrwm20.854281944147488
snrdcsf7.743726720864725
snrdgm35.76877689301272
snrdtotal35.102353921470154
snrdwm61.794558150533014
spacingx0.9999999403953552
spacingy1.0
spacingz0.9999998807907104
summarybgk26.93543886133015
summarybgmad0.0
summarybgmean4.504478434370616
summarybgmedian0.0
summarybgn254623.0
summarybgp050.0
summarybgp9525.694904383271933
summarybgstdv10.601604017243469
summarycsfk1.014708369019031
summarycsfmad87.04357851150858
summarycsfmean147.18771514072617
summarycsfmedian125.3111936878413
summarycsfn21996.0
summarycsfp0523.496562563814223
summarycsfp95335.68394084181637
summarycsfstdv95.63530575176812
summarygmk0.11437586621816465
summarygmmad83.3187025588667
summarygmmean577.5867678437723
summarygmmedian578.8205460738391
summarygmn35814.0
summarygmp05436.0059835201129
summarygmp95712.9559409247711
summarygmstdv84.04601518173784
summarywmk0.5748408614791432
summarywmmad45.511211639551654
summarywmmean998.2741149470972
summarywmmedian999.9771588519216
summarywmn163015.0
summarywmp05916.5886291600764
summarywmp951073.4531654305756
summarywmstdv47.950540536136884
tpmoverlapcsf0.15365310674699106
tpmoverlapgm0.46297365953316366
tpmoverlapwm0.505496041786672
wm2max0.7140969809658952

AcquisitionNumber4
BidsifyVersion0.3.5
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20181125 GCC6.3.0
EchoTime0.00377
ImageCommentsPiop
ImageOrientationPatientDICOM[0.999034, 0.0291783, -0.0328687, -0.0322686, 0.994684, -0.0977886]
ManufacturerPhilips
PatientPositionHFS
PhilipsRescaleIntercept0
PhilipsRescaleSlope9.25714
PhilipsScaleSlope0.00730305
ProtocolNameWIPt13dSENSE
ReconMatrixPE240
RepetitionTime0.008227
SeriesDescriptionImageMRSERIES
SeriesNumber4
UsePhilipsFloatNotDisplayScaling1

md5sum75299540d520042f9da0ec013e0d85c0
softwaremriqc
version23.0.0rc0
Rate Image

  • Exclude
  • Poor
  • Acceptable
  • Excellent

Comments

Rater confidence:

  • Doubtful
  • Confident
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.